Run Management Strategy Evaluation — run

Run an MSE simulation loop.

Usage

run_mse(om, mp, mse_options, nyears_input = NA, seed = 1120, file_suffix = "")

om: an operating model list object (should minimally contain a list object with demographic parameters, an array of initial NAAs, a list object specifying recruitment, and a list of model_options).
mp: a list object specifying the management procedure to be applied during the projection period
nyears_input: number of years to simulate forward (will override the dimensions of the demagraphic parameters matrices defined in the OM)
seed: random seed
...: parameters to pass to the `hcr` function
run_estimation: whether to run the estimation procedure or not. If FALSE, management procedures will use OM outputs rather than EM estimates to compute future harvest from the management procedure function.
spinup_years: number of years before estimation process should begin