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Compute Average ABI across projection period

average_abi.Rd

Compute average ABI (median and CIs; Griffiths et al. 2024) per year across all years and simulation seeds, for each combination of operating models and management procedures.

Usage

average_abi(
  model_runs,
  extra_columns,
  ref_naa,
  hcr_filter,
  om_filter,
  interval_widths = c(0.5, 0.8),
  time_horizon = c(65, NA),
  extra_filter = NULL,
  relative = NULL,
  summarise_by = c("om", "hcr"),
  summary_out = TRUE
)

Arguments

model_runs

list of completed MSE simulations runs

extra_columns

data.frame specifying names for OM and HCR to attach to each model_run (see `bind_mse_outputs` for more details)

ref_naa

reference age structure for ABI computation

hcr_filter

vector of HCR names to calculate metric over

om_filter

vector of OM names to calculate metric over

interval_widths

confidence intevrals to compute

extra_filter

an additional set of filters to apply before computing medians and confidence intervals

relative

a management procedure to compute metric relative to

summarise_by

vector of columns to summarise metric by

summary_out

whether to output data summarised by `ggdist` or full data